chore(pre-commit): autoupdate

updates:
- [github.com/crate-ci/typos: v1.39.2 → v1](https://github.com/crate-ci/typos/compare/v1.39.2...v1)

.github/ISSUE_TEMPLATE/bug_report.md

@@ -2,7 +2,7 @@
 name: Bug report
 about: Topgrade is misbehaving
 title: ''
-type: Bug
+labels: 'C-bug'
 assignees: ''
 
 ---

.github/ISSUE_TEMPLATE/feature_request.md

@@ -2,7 +2,7 @@
 name: General feature request
 about: Suggest a general feature, or feature within an already existing step
 title: ''
-type: Feature
+labels: C-feature request
 assignees: ''
 
 ---

.github/ISSUE_TEMPLATE/step_request.md

@@ -2,8 +2,7 @@
 name: New step request
 about: Suggest a new step/package manager to update
 title: ''
-type: Feature
+labels: C-feature request, request step
-labels: request step
 assignees: ''
 
 ---

.github/workflows/check_config_creation_if_not_exists.yml

@@ -15,7 +15,7 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 

.github/workflows/check_i18n.yml

@@ -14,7 +14,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout code
-        uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+        uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 

.github/workflows/check_security_vulnerability.yml

@@ -24,7 +24,7 @@ jobs:
       security-events: write
     steps:
       - name: Checkout code
-        uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+        uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 
@@ -32,6 +32,6 @@ jobs:
         uses: microsoft/DevSkim-Action@4b5047945a44163b94642a1cecc0d93a3f428cc6 # v1.0.16
 
       - name: Upload DevSkim scan results to GitHub Security tab
-        uses: github/codeql-action/upload-sarif@e12f0178983d466f2f6028f5cc7a6d786fd97f4b # v4.31.4
+        uses: github/codeql-action/upload-sarif@014f16e7ab1402f30e7c3329d33797e7948572db # v4.31.3
         with:
           sarif_file: devskim-results.sarif

.github/workflows/ci.yml

@@ -23,7 +23,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout code
-        uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+        uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 
@@ -39,7 +39,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout code
-        uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+        uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 
@@ -135,7 +135,7 @@ jobs:
       matrix_target: ${{ matrix.target }}
     steps:
       - name: Checkout code
-        uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+        uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 

.github/workflows/create_release_assets.yml

@@ -33,7 +33,7 @@ jobs:
     env:
       tag: ${{ github.event.client_payload.tag }}
     steps:
-      - uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 
@@ -169,7 +169,7 @@ jobs:
       matrix_target: ${{ matrix.target }}
       tag: ${{ github.event.client_payload.tag }}
     steps:
-      - uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 

.github/workflows/dependency-review.yml

@@ -17,7 +17,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: 'Checkout Repository'
-        uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+        uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 

.github/workflows/release-plz.yml

@@ -17,7 +17,7 @@ jobs:
       id-token: write  # For trusted publishing
     steps:
       - name: Checkout repository
-        uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6
+        uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5
         with:
           fetch-depth: 0
           persist-credentials: false
@@ -53,7 +53,7 @@ jobs:
       cancel-in-progress: false
     steps:
       - name: Checkout repository
-        uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6
+        uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5
         with:
           fetch-depth: 0
           persist-credentials: false

.github/workflows/release_to_homebrew.yml

@@ -12,7 +12,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
     - name: Bump formulae
-      uses: dawidd6/action-homebrew-bump-formula@c5ddc585e75f0f750a8b4f610688b4bec9e80915 # v6
+      uses: dawidd6/action-homebrew-bump-formula@3428a0601bba3173ec0bdcc945be23fa27aa4c31 # v5
       with:
         # Custom GitHub access token with only the 'public_repo' scope enabled
         token: ${{secrets.HOMEBREW_ACCESS_TOKEN}}

.github/workflows/release_to_pypi.yml

@@ -15,7 +15,7 @@ jobs:
       matrix:
         target: [x86_64, x86, aarch64]
     steps:
-      - uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 
@@ -37,7 +37,7 @@ jobs:
       matrix:
         target: [x64, x86]
     steps:
-      - uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 
@@ -58,7 +58,7 @@ jobs:
       matrix:
         target: [x86_64, aarch64]
     steps:
-      - uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 
@@ -76,7 +76,7 @@ jobs:
   sdist:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 

.github/workflows/scorecards.yml

@@ -36,7 +36,7 @@ jobs:
 
     steps:
       - name: "Checkout code"
-        uses: actions/checkout@1af3b93b6815bc44a9784bd300feb67ff0d1eeb3 # v6.0.0
+        uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
         with:
           persist-credentials: false
 
@@ -71,6 +71,6 @@ jobs:
 
       # Upload the results to GitHub's code scanning dashboard.
       - name: "Upload to code-scanning"
-        uses: github/codeql-action/upload-sarif@e12f0178983d466f2f6028f5cc7a6d786fd97f4b # v4.31.4
+        uses: github/codeql-action/upload-sarif@014f16e7ab1402f30e7c3329d33797e7948572db # v4.31.3
         with:
           sarif_file: results.sarif

.pre-commit-config.yaml

@@ -16,7 +16,7 @@ repos:
   - id: trailing-whitespace
 
 - repo: https://github.com/crate-ci/typos
-  rev: v1.39.2
+  rev: v1
   hooks:
   - id: typos
 

CHANGELOG.md

@@ -7,40 +7,6 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
-## [16.4.2](https://github.com/topgrade-rs/topgrade/compare/v16.4.1...v16.4.2) - 2025-11-20
-
-### Other
-
-- *(deps)* update dawidd6/action-homebrew-bump-formula action to v6 ([#1543](https://github.com/topgrade-rs/topgrade/pull/1543))
-
-## [16.4.1](https://github.com/topgrade-rs/topgrade/compare/v16.4.0...v16.4.1) - 2025-11-20
-
-### Other
-
-- refactor run_containers error handling ([#1541](https://github.com/topgrade-rs/topgrade/pull/1541))
-
-## [16.4.0](https://github.com/topgrade-rs/topgrade/compare/v16.3.0...v16.4.0) - 2025-11-20
-
-### Added
-
-- *(os)* add Origami Linux support ([#1530](https://github.com/topgrade-rs/topgrade/pull/1530))
-- *(containers)* add option to run `system prune` ([#1523](https://github.com/topgrade-rs/topgrade/pull/1523))
-
-### Fixed
-
-- *(deps)* restore custom commands order ([#1535](https://github.com/topgrade-rs/topgrade/pull/1535))
-
-### Other
-
-- *(deps)* update clap, clap_builder, clap_complete ([#1540](https://github.com/topgrade-rs/topgrade/pull/1540))
-- *(deps)* update github/codeql-action action to v4.31.4 ([#1531](https://github.com/topgrade-rs/topgrade/pull/1531))
-- *(config)* add custom commands order test ([#1536](https://github.com/topgrade-rs/topgrade/pull/1536))
-- make Config methods more consistent by utilizing `#[derive(Default)]` ([#1534](https://github.com/topgrade-rs/topgrade/pull/1534))
-- *(issue templates)* use issue types ([#1533](https://github.com/topgrade-rs/topgrade/pull/1533))
-- *(deps)* lock file maintenance ([#1505](https://github.com/topgrade-rs/topgrade/pull/1505))
-- *(deps)* update actions/checkout digest to 93cb6ef ([#1526](https://github.com/topgrade-rs/topgrade/pull/1526))
-- *(deps)* update actions/checkout action to v5.0.1 ([#1527](https://github.com/topgrade-rs/topgrade/pull/1527))
-
 ## [16.3.0](https://github.com/topgrade-rs/topgrade/compare/v16.2.1...v16.3.0) - 2025-11-16
 
 ### Added

Cargo.lock

@@ -385,29 +385,19 @@ dependencies = [
 
 [[package]]
 name = "clap"
-version = "4.5.53"
+version = "4.5.51"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c9e340e012a1bf4935f5282ed1436d1489548e8f72308207ea5df0e23d2d03f8"
+checksum = "4c26d721170e0295f191a69bd9a1f93efcdb0aff38684b61ab5750468972e5f5"
 dependencies = [
  "clap_builder",
  "clap_derive",
 ]
 
-[[package]]
-name = "clap-cargo"
-version = "0.15.2"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d546f0e84ff2bfa4da1ce9b54be42285767ba39c688572ca32412a09a73851e5"
-dependencies = [
- "anstyle",
- "clap",
-]
-
 [[package]]
 name = "clap_builder"
-version = "4.5.53"
+version = "4.5.51"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d76b5d13eaa18c901fd2f7fca939fefe3a0727a953561fefdf3b2922b8569d00"
+checksum = "75835f0c7bf681bfd05abe44e965760fea999a5286c6eb2d59883634fd02011a"
 dependencies = [
  "anstream",
  "anstyle",
@@ -417,9 +407,9 @@ dependencies = [
 
 [[package]]
 name = "clap_complete"
-version = "4.5.61"
+version = "4.5.60"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "39615915e2ece2550c0149addac32fb5bd312c657f43845bb9088cb9c8a7c992"
+checksum = "8e602857739c5a4291dfa33b5a298aeac9006185229a700e5810a3ef7272d971"
 dependencies = [
  "clap",
 ]
@@ -1128,9 +1118,9 @@ checksum = "e5274423e17b7c9fc20b6e7e208532f9b19825d82dfd615708b70edd83df41f1"
 
 [[package]]
 name = "hashbrown"
-version = "0.16.1"
+version = "0.16.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "841d1cc9bed7f9236f321df977030373f4a4163ae1a7dbfe1a51a2c1a51d9100"
+checksum = "5419bdc4f6a9207fbeba6d11b604d481addf78ecd10c11ad51e76c2f6482748d"
 
 [[package]]
 name = "heck"
@@ -1412,12 +1402,12 @@ checksum = "964de6e86d545b246d84badc0fef527924ace5134f30641c203ef52ba83f58d5"
 
 [[package]]
 name = "indexmap"
-version = "2.12.1"
+version = "2.12.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0ad4bb2b565bca0645f4d68c5c9af97fba094e9791da685bf83cb5f3ce74acf2"
+checksum = "6717a8d2a5a929a1a2eb43a12812498ed141a0bcfb7e8f7844fbdbe4303bba9f"
 dependencies = [
  "equivalent",
- "hashbrown 0.16.1",
+ "hashbrown 0.16.0",
  "serde",
  "serde_core",
 ]
@@ -2974,12 +2964,11 @@ checksum = "df8b2b54733674ad286d16267dcfc7a71ed5c776e4ac7aa3c3e2561f7c637bf2"
 
 [[package]]
 name = "topgrade"
-version = "16.4.2"
+version = "16.3.0"
 dependencies = [
  "base64ct",
  "chrono",
  "clap",
- "clap-cargo",
  "clap_complete",
  "clap_mangen",
  "color-eyre",

Cargo.toml

@@ -6,7 +6,7 @@ keywords = ["upgrade", "update"]
 license = "GPL-3.0-or-later"
 repository = "https://github.com/topgrade-rs/topgrade"
 rust-version = "1.84.1"
-version = "16.4.2"
+version = "16.3.0"
 authors = ["Roey Darwish Dror <roey.ghost@gmail.com>", "Thomas Schönauer <t.schoenauer@hgs-wt.at>"]
 exclude = ["doc/screenshot.gif", "BREAKINGCHANGES_dev.md"]
 edition = "2021"
@@ -17,7 +17,7 @@ readme = "README.md"
 home = "=0.5.11"
 etcetera = "=0.10.0"
 serde = { version = "~1.0", features = ["derive"] }
-toml = { version = "=0.9.8", features = ["preserve_order"] }
+toml = "=0.9.8"
 which_crate = { version = "~8.0", package = "which" }
 shellexpand = "~3.1"
 clap = { version = "~4.5", features = ["cargo", "derive"] }
@@ -51,7 +51,6 @@ serde_json = "1.0.145"
 ignore = "=0.4.23"
 globset = "=0.4.16"
 base64ct = "<1.8.0"
-clap-cargo = "0.15.2"
 
 [patch.crates-io]
 mac-notification-sys = { git = "https://github.com/h4llow3En/mac-notification-sys" }

README.md

@@ -3,10 +3,10 @@
     <img alt="Topgrade" src="doc/topgrade_transparent.png" width="850px">
   </h1>
 
-<a href="https://github.com/topgrade-rs/topgrade/releases"><img alt="GitHub Release" src="https://img.shields.io/github/release/topgrade-rs/topgrade.svg"></a>
+  <a href="https://github.com/topgrade-rs/topgrade/releases"><img alt="GitHub Release" src="https://img.shields.io/github/release/topgrade-rs/topgrade.svg"></a>
-<a href="https://crates.io/crates/topgrade"><img alt="crates.io" src="https://img.shields.io/crates/v/topgrade.svg"></a>
+  <a href="https://crates.io/crates/topgrade"><img alt="crates.io" src="https://img.shields.io/crates/v/topgrade.svg"></a>
-<a href="https://aur.archlinux.org/packages/topgrade"><img alt="AUR" src="https://img.shields.io/aur/version/topgrade.svg"></a>
+  <a href="https://aur.archlinux.org/packages/topgrade"><img alt="AUR" src="https://img.shields.io/aur/version/topgrade.svg"></a>
-<a href="https://formulae.brew.sh/formula/topgrade"><img alt="Homebrew" src="https://img.shields.io/homebrew/v/topgrade.svg"></a>
+  <a href="https://formulae.brew.sh/formula/topgrade"><img alt="Homebrew" src="https://img.shields.io/homebrew/v/topgrade.svg"></a>
 
   <img alt="Demo" src="doc/topgrade_demo.gif">
 </div>
@@ -37,8 +37,6 @@ To remedy this, **Topgrade** detects which tools you use and runs the appropriat
 - Windows ([Winget](https://learn.microsoft.com/en-us/windows/package-manager/winget/)): [
   `winget install --id=topgrade-rs.topgrade  -e`](https://winstall.app/apps/topgrade-rs.topgrade)
 - macOS or Linux ([Homebrew](https://brew.sh/)): [`brew install topgrade`](https://formulae.brew.sh/formula/topgrade)
-- Fedora/RHEL/AlmaLinux/CentOS-Stream ([Copr](https://copr.fedorainfracloud.org/)): [
-  `sudo dnf copr enable lilay/topgrade && sudo dnf install topgrade`](https://copr.fedorainfracloud.org/coprs/lilay/topgrade/)
 
 ### Community-maintained
 
@@ -48,6 +46,8 @@ To remedy this, **Topgrade** detects which tools you use and runs the appropriat
   `scoop bucket add main && scoop install main/topgrade`](https://scoop.sh/#/apps?q=topgrade)
 - macOS ([MacPorts](https://www.macports.org/)): [
   `sudo port install topgrade`](https://ports.macports.org/port/topgrade/)
+- Fedora ([Copr](https://copr.fedorainfracloud.org/)): [
+  `dnf copr enable lilay/topgrade && dnf install topgrade`](https://copr.fedorainfracloud.org/coprs/lilay/topgrade/)
 - NixOS or Nix (nixpkgs): [topgrade](https://search.nixos.org/packages?show=topgrade)
 - Void Linux: [`sudo xbps-install -S topgrade`](https://voidlinux.org/packages/?arch=x86_64&q=topgrade)
 

config.example.toml

@@ -291,20 +291,6 @@
 # (default: false)
 # exclude_encrypted = false
 
-[mise]
-# Upgrades to the latest version available, bumping the version in mise.toml
-# (default: false)
-# bump = false
-
-# Number of jobs to run in parallel
-# (default: 4)
-# jobs = 4
-
-# Run interactively
-# (default: false)
-# interactive = false
-
-
 [npm]
 # Use sudo if the NPM directory isn't owned by the current user
 # use_sudo = true
@@ -356,10 +342,6 @@
 # Specify the runtime to use for containers (default: "docker", allowed values: "docker", "podman")
 # runtime = "podman"
 
-# Run 'docker system prune' to clean up unused containers, networks, and build cache
-# (default: false)
-# system_prune = false
-
 [lensfun]
 # If disabled, Topgrade invokes `lensfun‑update‑data` without root privilege,
 # then the update will be only available to you. Otherwise, `sudo` is required,

locales/app.yml

@@ -694,14 +694,6 @@ _version: 2
   zh_CN: "不是专用的 macOS brew"
   zh_TW: "不是專門的 macOS brew"
   de: "Kein angepasstes Brew für macOS"
-"Homebrew cask support on Linux requires Homebrew 4.5.0 or later (found {version})":
-  en: "Homebrew cask support on Linux requires Homebrew 4.5.0 or later (found %{version})"
-  lt: "Homebrew cask palaikymas Linux sistemoje reikalauja Homebrew 4.5.0 arba naujesnes versijos (rasta %{version})"
-  es: "El soporte de cask de Homebrew en Linux requiere Homebrew 4.5.0 o posterior (encontrado %{version})"
-  fr: "Le support de cask Homebrew sur Linux nécessite Homebrew 4.5.0 ou supérieur (trouvé %{version})"
-  zh_CN: "Linux 上的 Homebrew cask 支持需要 Homebrew 4.5.0 或更高版本（找到 %{version}）"
-  zh_TW: "Linux 上的 Homebrew cask 支援需要 Homebrew 4.5.0 或更高版本（找到 %{version}）"
-  de: "Homebrew-Cask-Unterstützung unter Linux erfordert Homebrew 4.5.0 oder höher (gefunden %{version})"
 "Guix Pull Failed, Skipping":
   en: "Guix Pull Failed, Skipping"
   lt: "Guix traukti nepavyko, praleidžiama"

pyproject.toml

@@ -5,20 +5,13 @@ build-backend = "maturin"
 [project]
 name = "topgrade"
 dynamic = ["version"]
-description = "Upgrade all the things"
-readme = "README.md"
-license = "GPL-3.0-or-later"
 requires-python = ">=3.7"
 classifiers = [
-    "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
     "Programming Language :: Rust",
     "Programming Language :: Python :: Implementation :: CPython",
     "Programming Language :: Python :: Implementation :: PyPy",
 ]
 
-urls.bugs = "https://github.com/topgrade-rs/topgrade/issues"
-urls.homepage = "https://github.com/topgrade-rs/topgrade"
-
 
 [tool.maturin]
 bindings = "bin"

src/config.rs

@@ -60,7 +60,6 @@ pub struct Containers {
     #[merge(strategy = crate::utils::merge_strategies::vec_prepend_opt)]
     ignored_containers: Option<Vec<String>>,
     runtime: Option<ContainerRuntime>,
-    system_prune: Option<bool>,
 }
 
 #[derive(Deserialize, Default, Debug, Merge)]
@@ -173,15 +172,6 @@ pub struct Chezmoi {
     exclude_encrypted: Option<bool>,
 }
 
-#[derive(Deserialize, Default, Debug, Merge)]
-#[serde(deny_unknown_fields)]
-#[allow(clippy::upper_case_acronyms)]
-pub struct Mise {
-    bump: Option<bool>,
-    interactive: Option<bool>,
-    jobs: Option<u32>,
-}
-
 #[derive(Deserialize, Default, Debug, Merge)]
 #[serde(deny_unknown_fields)]
 #[allow(clippy::upper_case_acronyms)]
@@ -213,10 +203,9 @@ pub struct Brew {
     fetch_head: Option<bool>,
 }
 
-#[derive(Debug, Deserialize, Clone, Copy, Default)]
+#[derive(Debug, Deserialize, Clone, Copy)]
 #[serde(rename_all = "snake_case")]
 pub enum ArchPackageManager {
-    #[default]
     Autodetect,
     Aura,
     GarudaUpdate,
@@ -228,10 +217,9 @@ pub enum ArchPackageManager {
     Yay,
 }
 
-#[derive(Clone, Copy, Debug, Deserialize, Default)]
+#[derive(Clone, Copy, Debug, Deserialize)]
 #[serde(rename_all = "snake_case")]
 pub enum ContainerRuntime {
-    #[default] // defaults to a popular choice
     Docker,
     Podman,
 }
@@ -369,11 +357,10 @@ pub struct Misc {
     show_distribution_summary: Option<bool>,
 }
 
-#[derive(Clone, Copy, Debug, Deserialize, ValueEnum, Default)]
+#[derive(Clone, Copy, Debug, Deserialize, ValueEnum)]
 #[clap(rename_all = "snake_case")]
 #[serde(rename_all = "snake_case")]
 pub enum TmuxSessionMode {
-    #[default]
     AttachIfNotInSession,
     AttachAlways,
 }
@@ -480,9 +467,6 @@ pub struct ConfigFile {
     #[merge(strategy = crate::utils::merge_strategies::inner_merge_opt)]
     chezmoi: Option<Chezmoi>,
 
-    #[merge(strategy = crate::utils::merge_strategies::inner_merge_opt)]
-    mise: Option<Mise>,
-
     #[merge(strategy = crate::utils::merge_strategies::inner_merge_opt)]
     yarn: Option<Yarn>,
 
@@ -729,7 +713,7 @@ impl ConfigFile {
 // TODO: i18n of clap currently not easily possible. Waiting for https://github.com/clap-rs/clap/issues/380
 // Tracking issue for i18n: https://github.com/topgrade-rs/topgrade/issues/859
 #[derive(Parser, Debug)]
-#[command(name = "topgrade", version, styles = clap_cargo::style::CLAP_STYLING)]
+#[command(name = "topgrade", version)]
 pub struct CommandLineArgs {
     /// Edit the configuration file
     #[arg(long = "edit-config")]
@@ -971,16 +955,7 @@ impl Config {
             .containers
             .as_ref()
             .and_then(|containers| containers.runtime)
-            .unwrap_or_default()
+            .unwrap_or(ContainerRuntime::Docker) // defaults to a popular choice
-    }
-
-    /// Whether to run system prune for containers.
-    pub fn containers_system_prune(&self) -> bool {
-        self.config_file
-            .containers
-            .as_ref()
-            .and_then(|containers| containers.system_prune)
-            .unwrap_or(false)
     }
 
     /// Tell whether the specified step should run.
@@ -1052,7 +1027,7 @@ impl Config {
             .misc
             .as_ref()
             .and_then(|misc| misc.tmux_session_mode)
-            .unwrap_or_default()
+            .unwrap_or(TmuxSessionMode::AttachIfNotInSession)
     }
 
     /// Tell whether we should perform cleanup steps.
@@ -1306,7 +1281,7 @@ impl Config {
             .vim
             .as_ref()
             .and_then(|c| c.force_plug_update)
-            .unwrap_or(false)
+            .unwrap_or_default()
     }
 
     /// Whether to send a desktop notification at the beginning of every step
@@ -1379,7 +1354,7 @@ impl Config {
             .linux
             .as_ref()
             .and_then(|s| s.arch_package_manager)
-            .unwrap_or_default()
+            .unwrap_or(ArchPackageManager::Autodetect)
     }
 
     /// Extra yay arguments
@@ -1816,26 +1791,6 @@ impl Config {
             .unwrap_or(false)
     }
 
-    pub fn mise_bump(&self) -> bool {
-        self.config_file
-            .mise
-            .as_ref()
-            .and_then(|mise| mise.bump)
-            .unwrap_or(false)
-    }
-
-    pub fn mise_jobs(&self) -> u32 {
-        self.config_file.mise.as_ref().and_then(|mise| mise.jobs).unwrap_or(4)
-    }
-
-    pub fn mise_interactive(&self) -> bool {
-        self.config_file
-            .mise
-            .as_ref()
-            .and_then(|mise| mise.interactive)
-            .unwrap_or(false)
-    }
-
     pub fn vscode_profile(&self) -> Option<&str> {
         let vscode_cfg = self.config_file.vscode.as_ref()?;
         let profile = vscode_cfg.profile.as_ref()?;
@@ -1924,24 +1879,4 @@ mod test {
         config.opt = CommandLineArgs::parse_from(["topgrade", "--remote-host-limit", "other_hostname"]);
         assert!(!config.should_execute_remote(Ok("hostname".to_string()), "user@remote_hostname"));
     }
-
-    /// Ensure that custom commands are stored in insertion order.
-    #[test]
-    fn test_custom_commands_order() {
-        let toml_str = r#"
-[commands]
-z = "cmd_z"
-y = "cmd_y"
-x = "cmd_x"
-"#;
-        let order: Vec<_> = toml::from_str::<ConfigFile>(toml_str)
-            .expect("toml parse error")
-            .commands
-            .expect("commands field missing")
-            .keys()
-            .cloned()
-            .collect();
-
-        assert_eq!(order, vec!["z", "y", "x"]);
-    }
 }

src/step.rs

@@ -225,7 +225,7 @@ impl Step {
             Bin => runner.execute(*self, "bin", || generic::bin_update(ctx))?,
             Bob => runner.execute(*self, "Bob", || generic::run_bob(ctx))?,
             BrewCask => {
-                #[cfg(any(target_os = "linux", target_os = "macos"))]
+                #[cfg(target_os = "macos")]
                 runner.execute(*self, "Brew Cask", || unix::run_brew_cask(ctx, unix::BrewVariant::Path))?;
                 #[cfg(target_os = "macos")]
                 runner.execute(*self, "Brew Cask (Intel)", || {
@@ -750,7 +750,6 @@ pub(crate) fn default_steps() -> Vec<Step> {
         Restarts,
         Flatpak,
         BrewFormula,
-        BrewCask,
         Lure,
         Waydroid,
         AutoCpufreq,

src/steps/containers.rs

@@ -11,7 +11,7 @@ use tracing::{debug, error, warn};
 use wildmatch::WildMatch;
 
 use crate::command::CommandExt;
-use crate::error::{SkipStep, TopgradeError};
+use crate::error::{self, SkipStep, TopgradeError};
 use crate::terminal::print_separator;
 use crate::{execution_context::ExecutionContext, utils::require};
 use rust_i18n::t;
@@ -185,6 +185,7 @@ pub fn run_containers(ctx: &ExecutionContext) -> Result<()> {
         ));
     }
 
+    let mut success = true;
     let containers =
         list_containers(&crt, ctx.config().containers_ignored_tags()).context("Failed to list Docker containers")?;
     debug!("Containers to inspect: {:?}", containers);
@@ -219,21 +220,22 @@ pub fn run_containers(ctx: &ExecutionContext) -> Result<()> {
                 continue;
             }
 
-            return Err(e);
+            success = false;
         }
     }
 
-    if ctx.config().containers_system_prune() {
+    if ctx.config().cleanup() {
-        // Run system prune to clean up unused containers, networks, and build cache
-        ctx.execute(&crt)
-            .args(["system", "prune", "--force"])
-            .status_checked()?
-    // Only run `image prune` if we don't run `system prune`
-    } else if ctx.config().cleanup() {
         // Remove dangling images
         debug!("Removing dangling images");
-        ctx.execute(&crt).args(["image", "prune", "-f"]).status_checked()?
+        if let Err(e) = ctx.execute(&crt).args(["image", "prune", "-f"]).status_checked() {
+            error!("Removing dangling images failed: {}", e);
+            success = false;
+        }
     }
 
-    Ok(())
+    if success {
+        Ok(())
+    } else {
+        Err(eyre!(error::StepFailed))
+    }
 }

src/steps/os/linux.rs

@@ -78,8 +78,6 @@ impl Distribution {
             Some("neon") => Distribution::KDENeon,
             Some("openmandriva") => Distribution::OpenMandriva,
             Some("pclinuxos") => Distribution::PCLinuxOS,
-            Some(id) if id.starts_with("origami") => Distribution::FedoraImmutable,
-
             _ => {
                 if let Some(name) = name {
                     if name.contains("Vanilla") {
@@ -1343,11 +1341,4 @@ mod tests {
     fn test_cachyos() {
         test_template(include_str!("os_release/cachyos"), Distribution::Arch);
     }
-
-    #[test]
-    fn test_origami() {
-        test_template(include_str!("os_release/origami"), Distribution::FedoraImmutable);
-        test_template(include_str!("os_release/origami-nvidia"), Distribution::FedoraImmutable);
-        test_template(include_str!("os_release/origami-test"), Distribution::FedoraImmutable);
-    }
 }

src/steps/os/os_release/origami

@@ -1,23 +0,0 @@
-NAME="Origami Linux"
-VERSION="43.20251117.0 (COSMIC Atomic)"
-RELEASE_TYPE="stable"
-ID="origami-linux"
-VERSION_ID="43"
-VERSION_CODENAME=""
-PRETTY_NAME="Origami 折り紙"
-ANSI_COLOR="0;38;2;60;110;180"
-LOGO="fedora-logo-icon"
-CPE_NAME="cpe:/o:fedoraproject:fedora:43"
-DEFAULT_HOSTNAME="origami"
-HOME_URL="https://origami.wf/"
-DOCUMENTATION_URL="https://docs.fedoraproject.org/en-US/fedora/f43/"
-SUPPORT_URL="https://ask.fedoraproject.org/"
-BUG_REPORT_URL="https://gitlab.com/groups/origami-linux/-/issues"
-REDHAT_BUGZILLA_PRODUCT="Fedora"
-REDHAT_BUGZILLA_PRODUCT_VERSION="43"
-REDHAT_SUPPORT_PRODUCT="Fedora"
-REDHAT_SUPPORT_PRODUCT_VERSION="43"
-SUPPORT_END="2026-12-02"
-VARIANT="COSMIC Atomic"
-VARIANT_ID="cosmic-atomic"
-OSTREE_VERSION="43.20251117.0"

src/steps/os/os_release/origami-nvidia

@@ -1,23 +0,0 @@
-NAME="Origami Linux Nvidia"
-VERSION="43.20251117.0 (COSMIC Atomic)"
-RELEASE_TYPE="stable"
-ID="origami-linux-nvidia"
-VERSION_ID="43"
-VERSION_CODENAME=""
-PRETTY_NAME="Origami 折り紙"
-ANSI_COLOR="0;38;2;60;110;180"
-LOGO="fedora-logo-icon"
-CPE_NAME="cpe:/o:fedoraproject:fedora:43"
-DEFAULT_HOSTNAME="origami"
-HOME_URL="https://origami.wf/"
-DOCUMENTATION_URL="https://docs.fedoraproject.org/en-US/fedora/f43/"
-SUPPORT_URL="https://ask.fedoraproject.org/"
-BUG_REPORT_URL="https://gitlab.com/groups/origami-linux/-/issues"
-REDHAT_BUGZILLA_PRODUCT="Fedora"
-REDHAT_BUGZILLA_PRODUCT_VERSION="43"
-REDHAT_SUPPORT_PRODUCT="Fedora"
-REDHAT_SUPPORT_PRODUCT_VERSION="43"
-SUPPORT_END="2026-12-02"
-VARIANT="COSMIC Atomic"
-VARIANT_ID="cosmic-atomic"
-OSTREE_VERSION="43.20251117.0"

src/steps/os/os_release/origami-test

@@ -1,23 +0,0 @@
-NAME="Origami Linux Test"
-VERSION="43.20251117.0 (COSMIC Atomic)"
-RELEASE_TYPE="stable"
-ID="origami-linux-test"
-VERSION_ID="43"
-VERSION_CODENAME=""
-PRETTY_NAME="Origami 折り紙"
-ANSI_COLOR="0;38;2;60;110;180"
-LOGO="fedora-logo-icon"
-CPE_NAME="cpe:/o:fedoraproject:fedora:43"
-DEFAULT_HOSTNAME="origami"
-HOME_URL="https://origami.wf/"
-DOCUMENTATION_URL="https://docs.fedoraproject.org/en-US/fedora/f43/"
-SUPPORT_URL="https://ask.fedoraproject.org/"
-BUG_REPORT_URL="https://gitlab.com/groups/origami-linux/-/issues"
-REDHAT_BUGZILLA_PRODUCT="Fedora"
-REDHAT_BUGZILLA_PRODUCT_VERSION="43"
-REDHAT_SUPPORT_PRODUCT="Fedora"
-REDHAT_SUPPORT_PRODUCT_VERSION="43"
-SUPPORT_END="2026-12-02"
-VARIANT="COSMIC Atomic"
-VARIANT_ID="cosmic-atomic"
-OSTREE_VERSION="43.20251117.0"

src/steps/os/unix.rs

@@ -81,6 +81,7 @@ impl BrewVariant {
     /// Execute an "internal" brew command, i.e. one that should always be run
     /// even when dry-running. Basically just a wrapper around [`Command::new`]
     /// that uses `arch` to run using the correct architecture if needed.
+    #[cfg(target_os = "macos")]
     fn execute_internal(self) -> Command {
         match self {
             BrewVariant::MacIntel if cfg!(target_arch = "aarch64") => {
@@ -364,48 +365,12 @@ pub fn run_brew_formula(ctx: &ExecutionContext, variant: BrewVariant) -> Result<
     Ok(())
 }
 
-#[cfg(any(target_os = "linux", target_os = "macos"))]
+#[cfg(target_os = "macos")]
 pub fn run_brew_cask(ctx: &ExecutionContext, variant: BrewVariant) -> Result<()> {
     let binary_name = require(variant.binary_name())?;
-
-    #[cfg(target_os = "macos")]
     if variant.is_path() && !BrewVariant::is_macos_custom(binary_name) {
         return Err(SkipStep(t!("Not a custom brew for macOS").to_string()).into());
     }
-
-    #[cfg(target_os = "linux")]
-    {
-        // Homebrew cask support was added in version 4.5.0
-        let version_output = Command::new(&binary_name).arg("--version").output_checked_utf8()?;
-
-        let version_line = version_output
-            .stdout
-            .lines()
-            .next()
-            .ok_or_else(|| eyre!(output_changed_message!("brew --version", "no output lines")))?;
-
-        let version_str = version_line.split_whitespace().nth(1).ok_or_else(|| {
-            eyre!(output_changed_message!(
-                "brew --version",
-                "Expected version after 'Homebrew'"
-            ))
-        })?;
-
-        let version = Version::parse(version_str)
-            .wrap_err_with(|| output_changed_message!("brew --version", "Invalid version"))?;
-
-        if version < Version::new(4, 5, 0) {
-            return Err(SkipStep(
-                t!(
-                    "Homebrew cask support on Linux requires Homebrew 4.5.0 or later (found {version})",
-                    version = version
-                )
-                .to_string(),
-            )
-            .into());
-        }
-    }
-
     print_separator(format!("{} - Cask", variant.step_title()));
 
     let cask_upgrade_exists = variant
@@ -859,23 +824,7 @@ pub fn run_mise(ctx: &ExecutionContext) -> Result<()> {
         }
     }
 
-    let mut cmd = ctx.execute(&mise);
+    ctx.execute(&mise).arg("upgrade").status_checked()
-
-    cmd.arg("upgrade");
-
-    if ctx.config().mise_interactive() {
-        cmd.arg("--interactive");
-    }
-
-    if ctx.config().mise_bump() {
-        cmd.arg("--bump");
-    }
-
-    if ctx.config().mise_jobs() != 4 {
-        cmd.args(["--jobs", &ctx.config().mise_jobs().to_string()]);
-    }
-
-    cmd.status_checked()
 }
 
 pub fn run_home_manager(ctx: &ExecutionContext) -> Result<()> {